Denis Noble’s Philosophy of Biology

The Proposal of an “Active Darwinism” and the Need for a Biology Beyond Genes for the 21st Century

Authors

  • Francisco Javier Navarro Prieto Universidad Autónoma de Madrid

DOI:

https://doi.org/10.48160/18532330me15.382

Keywords:

Denis Noble, Darwinism, genes, antirreductionism

Abstract

This article provides an introduction to Denis Noble’s philosophy of biology. The “passive Darwinism” derived from the gene-centered perspective on evolution considers that the agency exhibited by living organisms is an apparent phenomenon, whose true causes are molecular or genetic. In contrast, Denis Noble defends an “active Darwinism” based on two principles: (1) the anti-reductionist principle, according to which higher levels of organization in biological systems can constrain lower levels, and their agency is therefore not reducible to that of the latter; (2) the relativist principle of biology, which more generally denies the existence of a privileged level of causation in biological systems. Framed within the organicist tradition, Noble’s “biology beyond the genes” offers a reconceptualization of biological systems that shifts the explanatory focus from the primacy of genes to a more dynamic and reciprocal conception of causal interactions between levels of biological organization.

References

Agafonov, V. A., Negrobov, V. V. y A. U. Igamberdiev (2021), “Symbiogenesis as a Driving Force of Evolution: The Legacy of Boris Kozo-Polyansky”, Biosystems 199: 104302. https://doi.org/10.1016/j.biosystems.2020.104302

Ball, P. (2023), “What Distinguishes the Elephant from E. Coli: Causal Spreading and the Biological Principles of Metazoan Complexity”, Journal of Biosciences 48(2): 14. https://doi.org/10.1007/s12038-023-00344-4

Ball, P. (2024), How Life Works: A User’s Guide to The New Biology, London: Picador.

Bertalanffy, L. (1933), Modern Theories of Development: An Introduction to Theoretical Biology, New York: Humphrey Milford.

Bertalanffy, L. (1952), Problems of Life: An Evaluation of Modern Biological Thought and Scientific Thought, London: Watts & Co.

Brun-Usan, M., Rago, A., Thies, C., Uller, T. y R. A. Watson (2021), “Development and Selective Grain Make Plasticity ‘Take the Lead’ in Adaptive Evolution”, BMC Ecology and Evolution 21(1): 205. https://doi.org/10.1186/s12862-021-01936-0

Campbell, D. T. (1974), “‘Downward Causation’ in Hierarchically Organised Biological Systems”, Studies in the Philosophy of Biology 179-186. https://doi.org/10.1007/978-1-349-01892-5_11

Dawkins, R. (1976), The Selfish Gene, Oxford: Oxford University Press.

Deisseroth, K., Mermelstein, P. G., Xia, H. y R. W. Tsien (2003), “Signaling from Synapse to Nucleus: The Logic Behind the Mechanisms”, Current Opinion in Neurobiology 13(3): 354-365. https://doi.org/10.1016/S0959-4388(03)00076-X

Fábregas Tejeda, A. y M. Martín-Villuendas (2023), “¿Qué es la filosofía de la biología organismal?”, Artefactos 12(1): 5-25. https://doi.org/10.14201/art2023121525

Fábregas-Tejeda, A. y F. Vergara-Silva (2018), “The Emerging Structure of the Extended Evolutionary Synthesis: Where Does Evo-Devo Fit In?”, Theory in Biosciences 137(2): 169-184. https://doi.org/10.1007/s12064-018-0269-2

Fisher, R. A. (1930), The Genetical Theory of Natural Selection, Oxford: Clarendon Press. https://doi.org/10.5962/bhl.title.27468

Gerhart, J. y M. Kirschner (2007), “Theory of Facilitated Variation”, Proceedings of the National Academy of Sciences - PNAS 104 (Suppl. 1): 8582-8589. https://doi.org/10.1073/pnas.0701035104

Gilbert, S. F. y S. Sarkar (2000), “Embracing Complexity: Organicism for the 21st Century”, Developmental Dynamics 219(1): 1-9. https://doi.org/10.1002/1097-0177(2000)9999:9999<::AID-DVDY1036>3.0.CO

Godfrey-Smith, P. (2014), Philosophy of Biology, Princeton: Princeton University Press.

Godfrey‐Smith, P. (2010), “Causal Pluralism”, en Hitchcock, C., Menzies, P. C. y H. Beebee (eds.), The Oxford Handbook of Causation, Oxford: Oxford University Press, pp. 326-337. https://doi.org/10.1093/oxfordhb/9780199279739.003.0017

Gogarten, M. B., Gogarten, J. P. y L. Olendzenski (2009) (eds.), Horizontal Gene Transfer: Genomes in Flux, Totowa, NJ: Humana Press.

Haldane, J. S. (1931), The Philosophical Basis of Biology: Donnellan Lectures, London: Hodder and Stoughton.

Jablonka, E. y M. J. Lamb (1995) (eds.), Epigenetic Inheritance and Evolution: The Lamarckian Dimension, Oxford: Oxford University Press.

Jacob, F. (2014), La lógica de lo viviente: una historia de la herencia, Barcelona: Tusquets Editores.

Jaeger, J. (2023), The Fourth Perspective: Evolution and Organismal Agency, en Mossio, M. (ed.), Organization in Biology. History, Philosophy and Theory of the Life Sciences, vol. 33, Cham: Springer, pp. 159-186.

Johnstone, J. (1914), The Philosophy of Biology, Cambridge: Cambridge University Press.

Keller, E. F. (1995), Refiguring Life: Metaphors of Twentieth-Century Biology, New York: Columbia University Press.

Keller, E. F. (2014), “From Gene Action to Reactive Genomes”, The Journal of Physiology 592(11): 2423-2429. https://doi.org/10.1113/jphysiol.2014.270991

Kelvin, L. (1901), “Nineteenth Century Clouds over the Dynamical Theory of Heat and Light”, The London, Edinburgh, and Dublin Philosophical Magazine and Journal of Science 2(7): 1-40. https://doi.org/10.1080/14786440109462664

Laland, K., Matthews, B. y M. W. Feldman (2016), “Introduction to Niche Construction Theory”, Evolutionary Ecology 30(2): 191-202. https://doi.org/10.1007/s10682-016-9821-z

Laplace, P. S. (1814), Essai philosophique sur les probabilités, Paris: Bachelier, successeur de Mme Ve Courcier. https://doi.org/10.3931/e-rara-54889

Lewontin, R. C. (2000), Genes, organismo y ambiente: Las relaciones de causa y efecto en biología, Barcelona: Gedisa.

Mallet, J. (2007), “Hybrid Speciation”, Nature 446(7133): 279-283. https://doi.org/10.1038/nature05706

Margulis, L. y D. Sagan (2002), Acquiring Genomes: A Theory of the Origins of Species, New York: Basic Books.

Mitchell, K. J. (2023), Free Agents: How Evolution Gave Us Free Will, New Jersey: Princeton University Press.

Monod, J. (2022), El azar y la necesidad. Ensayo sobre la filosofía natural de la biología moderna, Barcelona: Tusquets Editores.

Moss, L. (2024), “Concepts of Agency: Introduction to the Thematic Section”, Biological Theory 19(1): 3-5. https://doi.org/10.1007/s13752-023-00454-0

Navarro Prieto, F. J. (2025), “NOTA CRÍTICA El libre albedrío es una función biológica evolucionada. Free Agents. How Evolution Gave Us Free Will Mitchell, K. J. (2023) New Jersey: Princeton University Press, 333 págs. (ISBN: 978-0691226231)”, Teorema 44(1): 1-4.

Needham, J. (1928), “Recent Developments in the Philosophy of Biology”, The Quarterly Review of Biology 3(1): 77-91. https://doi.org/10.1086/394294

Needham, J. (1942), Biochemistry and Morphogenesis, Cambridge: Cambridge University Press.

Nicholson, D. J. (2014), “The Return of the Organism as a Fundamental Explanatory Concept in Biology: The Return of the Organism”, Philosophy Compass 9(5): 347-359. https://doi.org/10.1111/phc3.12128

Niemann, H.-J. (2014), Karl Popper and the Two New Secrets of Life: Including Karl Popper’s Medawar Lecture 1986 and Three Related Texts, Tübingen: Mohr Siebeck.

Noble, D. (1960), “Cardiac Action and Pacemaker Potentials based on the Hodgkin-Huxley Equations”, Nature 188(4749): 495-497. https://doi.org/10.1038/188495b0

Noble, D. (1962), “A Modification of the Hodgkin—Huxley Equations Applicable to Purkinje Fibre Action and Pacemaker Potentials”, The Journal of Physiology 160(2): 317-352. https://doi.org/10.1113/jphysiol.1962.sp006849

Noble, D. (2006), The Music of Life: Biology Beyond the Genes, Oxford: Oxford University Press.

Noble, D. (2008), “Claude Bernard, The First Systems Biologist, and the Future of Physiology”, Experimental Physiology 93(1): 16-26. https://doi.org/10.1113/expphysiol.2007.038695

Noble, D. (2017), Dance to the Tune of Life: Biological Relativity, Cambridge: Cambridge University Press.

Noble, D. (2021), “The Illusions of the Modern Synthesis”, Biosemiotics 14(1): 5-24. https://doi.org/10.1007/s12304-021-09405-3

Noble, R. y D. Noble (2017), “Was the Watchmaker Blind? Or Was She One-Eyed?”, Biology (Basel) 6(4): 47. https://doi.org/10.3390/biology6040047

Noble, R. y D. Noble (2018), “Harnessing Stochasticity: How do Organisms Make Choices?”, Chaos 28(10): 106309. https://doi.org/10.1063/1.5039668

Noble, R. y D. Noble (2022), “Physiology Restores Purpose to Evolutionary Biology”, Biological Journal of the Linnean Society 139(4): 357-369. https://doi.org/10.1093/biolinnean/blac049

Noble, R. y D. Noble (2023), Understanding Living Systems, Cambridge: Cambridge University Press.

Noble, R., Tasaki, K., Noble, P. J. y D. Noble (2019), “Biological Relativity Requires Circular Causality but Not Symmetry of Causation: So, Where, What and When Are the Boundaries?”, Frontiers in Physiology 10: 827. https://doi.org/10.3389/fphys.2019.00827

Nuño de la Rosa, L. (2010), “Becoming Organisms: The Organisation of Development and the Development of Organisation”, History and Philosophy of the Life Sciences 32(2/3): 289-315.

Odling-Smee, F., Laland, K. N. y M. W. Feldman (2003), Niche Construction: The Neglected Process in Evolution, New Jersey: Princeton University Press.

Rosenberg, A. (2020), Reduction and Mechanism, Cambridge: Cambridge University Press. https://doi.org/10.1017/9781108592949

Schrödinger, E. (2023), ¿Qué es la vida?, Barcelona: Tusquets Editores.

Shapiro, J. A. (2013), “How Life Changes Itself: The Read-Write (RW) Genome”, Physics of Life Reviews 10(3): 287-323. https://doi.org/10.1016/j.plrev.2013.07.001

Spinoza, B. (2000), Ética demostrada según el orden geométrico, Madrid: Trotta.

Sultan, S. E. (2015), Organism and Environment: Ecological Development, Niche Construction, and Adaptation, Oxford: Oxford University Press.

Sun, D., Jeannot, K., Xiao, Y. y C.W. Knapp (2019), “Horizontal Gene Transfer Mediated Bacterial Antibiotic Resistance”, Frontiers in Microbiology 10(12): 1933. https://doi.org/10.3389/fmicb.2019.01933

Triviño, V. (2024), “Emergentism in the Biological Framework: The Case of Fitness”, Biology & Philosophy 39(2): 9. https://doi.org/10.1007/s10539-024-09945-1

Walsh, D. M. (2015), Organisms, Agency, and Evolution, Cambridge: Cambridge University Press. https://doi.org/10.1017/CBO9781316402719

Walsh, D. M. y G. Rupik (2023), “The Agential Perspective: Countermapping the Modern Synthesis”, Evolution & Development 25(6): 335-352. https://doi.org/10.1111/ede.12448

Webster, G. y B. C. Goodwin (1982), “The Origin of Species: A Structuralist Approach”, Journal of Social and Biological Structures 5(1): 15-47. https://doi.org/10.1016/S0140-1750(82)91390-2

West-Eberhard, M. (2003), Developmental Plasticity and Evolution, Oxford: Oxford University Press.

Woese, C. R. (2004), “A New Biology for a New Century”, Microbiology and Molecular Biology Reviews 68(2): 173-186. https://doi.org/10.1128/MMBR.68.2.173-186.2004

Woodger, J. H. (1929), Biological Principles: A Critical Study, London: Kegan Paul and Co.

Ylikoski, P. (2013), “Causal and Constitutive Explanation Compared”, Erkenntnis 78(Suppl. 2): 277-297. https://doi.org/10.1007/s10670-013-9513-9

Published

2025-04-29

How to Cite

Navarro Prieto, F. J. . (2025). Denis Noble’s Philosophy of Biology: The Proposal of an “Active Darwinism” and the Need for a Biology Beyond Genes for the 21st Century. Metatheoria – Journal of Philosophy and History of Science, 15(2), 39–55. https://doi.org/10.48160/18532330me15.382

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